Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Gm27892-201ENSMUST00000185017 106 ntBASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Gm42660-201ENSMUST00000197733 947 ntBASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Gm5781-201ENSMUST00000219792 443 ntBASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Gm45930-201ENSMUST00000221330 292 ntBASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 CT009764.1-201ENSMUST00000222260 483 ntBASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Gm10076-201ENSMUST00000073238 384 ntBASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nop56Q9D6Z1 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms