Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.23□□□□□ -0.61
Upk1aQ9D132 Gm27023-201ENSMUST00000182372 285 ntBASIC11.23□□□□□ -0.61
Upk1aQ9D132 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.23□□□□□ -0.61
Upk1aQ9D132 Gm37201-201ENSMUST00000191845 523 ntBASIC11.23□□□□□ -0.61
Upk1aQ9D132 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.23□□□□□ -0.61
Upk1aQ9D132 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.23□□□□□ -0.61
Upk1aQ9D132 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.23□□□□□ -0.61
Upk1aQ9D132 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk1aQ9D132 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Gm6114-201ENSMUST00000182472 968 ntBASIC11.22□□□□□ -0.61
Upk1aQ9D132 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.22□□□□□ -0.61
Upk1aQ9D132 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Gm28882-201ENSMUST00000185504 314 ntBASIC11.22□□□□□ -0.61
Upk1aQ9D132 Gm45784-201ENSMUST00000188360 142 ntBASIC11.22□□□□□ -0.61
Upk1aQ9D132 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.22□□□□□ -0.61
Upk1aQ9D132 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.22□□□□□ -0.61
Upk1aQ9D132 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.22□□□□□ -0.61
Upk1aQ9D132 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.22□□□□□ -0.61
Upk1aQ9D132 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk1aQ9D132 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk1aQ9D132 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Upk1aQ9D132 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Upk1aQ9D132 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.21□□□□□ -0.61
Upk1aQ9D132 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk1aQ9D132 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Upk1aQ9D132 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.61
Upk1aQ9D132 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk1aQ9D132 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk1aQ9D132 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk1aQ9D132 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Upk1aQ9D132 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk1aQ9D132 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Upk1aQ9D132 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk1aQ9D132 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk1aQ9D132 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk1aQ9D132 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Upk1aQ9D132 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk1aQ9D132 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms