Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.51□□□□□ -0.41
Ddx56Q9D0R4 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx56Q9D0R4 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.51□□□□□ -0.41
Ddx56Q9D0R4 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx56Q9D0R4 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx56Q9D0R4 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Gm11660-201ENSMUST00000120955 412 ntBASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Gm17812-201ENSMUST00000204935 318 ntBASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx56Q9D0R4 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Gm13996-201ENSMUST00000118456 430 ntBASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Gm5616-201ENSMUST00000165252 384 ntBASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Gm8741-201ENSMUST00000174736 384 ntBASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 AY036118-201ENSMUST00000200021 923 ntBASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Gm8913-201ENSMUST00000209491 641 ntBASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Gm5705-201ENSMUST00000066241 711 ntBASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx56Q9D0R4 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx56Q9D0R4 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.48□□□□□ -0.41
Ddx56Q9D0R4 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx56Q9D0R4 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx56Q9D0R4 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx56Q9D0R4 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms