Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Gm11511-201ENSMUST00000118146 540 ntBASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Gm5133-201ENSMUST00000118940 1255 ntBASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Gm25881-201ENSMUST00000157783 103 ntBASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Gm20426-201ENSMUST00000173657 440 ntBASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 2810404M03Rik-201ENSMUST00000188324 1245 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Gm3332-201ENSMUST00000189337 928 ntBASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Gm8956-201ENSMUST00000203939 825 ntBASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Gm7848-201ENSMUST00000210739 718 ntBASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Gm9797-202ENSMUST00000218003 294 ntBASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Elobl-201ENSMUST00000061938 819 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Gm44975-201ENSMUST00000207435 1390 ntBASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otud1Q9CUB6 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Gm14058-201ENSMUST00000116082 735 ntBASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Defa-ps4-201ENSMUST00000118021 183 ntBASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Gm12196-201ENSMUST00000120954 262 ntBASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Gm11450-201ENSMUST00000121144 333 ntBASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Gm20239-201ENSMUST00000196610 982 ntBASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Gm43184-201ENSMUST00000197247 542 ntBASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Gm4157-201ENSMUST00000211647 679 ntBASIC11.34□□□□□ -0.59
Otud1Q9CUB6 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms