Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Ldha-ps-201ENSMUST00000119390 995 ntBASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Gm27243-201ENSMUST00000183964 521 ntBASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Gm18473-201ENSMUST00000220543 868 ntBASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 AC132863.2-201ENSMUST00000226643 799 ntBASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Gm5884-201ENSMUST00000036712 1479 ntBASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Gm38157-201ENSMUST00000194178 1698 ntBASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Gm8805-201ENSMUST00000117848 313 ntBASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Gm12341-201ENSMUST00000119724 503 ntBASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Gm44772-201ENSMUST00000207623 1191 ntBASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 AC134254.1-201ENSMUST00000221362 167 ntBASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Gm24526-201ENSMUST00000082921 158 ntBASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.62□□□□□ -0.87
RTRAFQ9CQE8 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms