Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.25□□□□□ -0.61
Ska1Q9CPV1 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Gm10434-201ENSMUST00000101158 471 ntBASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Gm25261-201ENSMUST00000157416 134 ntBASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Snora78-201ENSMUST00000158630 128 ntBASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Gm5370-201ENSMUST00000187187 574 ntBASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Gm43433-201ENSMUST00000196573 481 ntBASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ska1Q9CPV1 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Gm13342-201ENSMUST00000121055 207 ntBASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.23□□□□□ -0.61
Ska1Q9CPV1 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms