Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.89□□□□□ -0.51
Trim33Q99PP7 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Gm23912-201ENSMUST00000104687 87 ntBASIC11.89□□□□□ -0.51
Trim33Q99PP7 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Gm5070-201ENSMUST00000177599 862 ntBASIC11.89□□□□□ -0.51
Trim33Q99PP7 Gm9230-201ENSMUST00000188228 532 ntBASIC11.89□□□□□ -0.51
Trim33Q99PP7 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.89□□□□□ -0.51
Trim33Q99PP7 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.89□□□□□ -0.51
Trim33Q99PP7 AC153936.1-201ENSMUST00000219874 395 ntBASIC11.89□□□□□ -0.51
Trim33Q99PP7 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim33Q99PP7 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.89□□□□□ -0.51
Trim33Q99PP7 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.89□□□□□ -0.51
Trim33Q99PP7 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.89□□□□□ -0.51
Trim33Q99PP7 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Trim33Q99PP7 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.89□□□□□ -0.51
Trim33Q99PP7 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.89□□□□□ -0.51
Trim33Q99PP7 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.88□□□□□ -0.51
Trim33Q99PP7 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.88□□□□□ -0.51
Trim33Q99PP7 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.88□□□□□ -0.51
Trim33Q99PP7 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.88□□□□□ -0.51
Trim33Q99PP7 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.88□□□□□ -0.51
Trim33Q99PP7 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Gm25890-201ENSMUST00000177643 165 ntBASIC11.88□□□□□ -0.51
Trim33Q99PP7 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.88□□□□□ -0.51
Trim33Q99PP7 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.88□□□□□ -0.51
Trim33Q99PP7 Gm22614-201ENSMUST00000178300 165 ntBASIC11.88□□□□□ -0.51
Trim33Q99PP7 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Gm18711-201ENSMUST00000199341 750 ntBASIC11.88□□□□□ -0.51
Trim33Q99PP7 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC11.88□□□□□ -0.51
Trim33Q99PP7 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Gm19187-201ENSMUST00000206781 892 ntBASIC11.88□□□□□ -0.51
Trim33Q99PP7 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms