Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b1Q99NB9 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Sf3b1Q99NB9 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.63□□□□□ -0.39
Sf3b1Q99NB9 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gm13888-201ENSMUST00000119148 422 ntBASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gm4310-201ENSMUST00000177847 889 ntBASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gm29499-201ENSMUST00000189151 486 ntBASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gm28329-201ENSMUST00000191208 689 ntBASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gm29171-201ENSMUST00000191397 486 ntBASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gm17831-201ENSMUST00000205579 900 ntBASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gm45550-201ENSMUST00000209380 946 ntBASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gm13916-201ENSMUST00000117368 628 ntBASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gm14460-201ENSMUST00000121511 639 ntBASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gm12208-201ENSMUST00000122004 163 ntBASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gm7666-201ENSMUST00000146631 819 ntBASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gm38117-201ENSMUST00000194653 939 ntBASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gm44551-201ENSMUST00000208804 171 ntBASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gm45398-201ENSMUST00000210561 165 ntBASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b1Q99NB9 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms