Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.21□□□□□ -0.62
Nkx6-1Q99MA9 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx6-1Q99MA9 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx6-1Q99MA9 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx6-1Q99MA9 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx6-1Q99MA9 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.62
Nkx6-1Q99MA9 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Gm12407-201ENSMUST00000180219 324 ntBASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Mir6407-201ENSMUST00000184510 101 ntBASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Gm43371-201ENSMUST00000202838 1031 ntBASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Nkx6-1Q99MA9 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Gm2553-201ENSMUST00000215986 605 ntBASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Gm5805-201ENSMUST00000072779 456 ntBASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms