Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Scrt1Q99M85 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Scrt1Q99M85 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Scrt1Q99M85 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
Scrt1Q99M85 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.46□□□□□ -0.73
Scrt1Q99M85 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Scrt1Q99M85 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.46□□□□□ -0.73
Scrt1Q99M85 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Scrt1Q99M85 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Scrt1Q99M85 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Scrt1Q99M85 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Scrt1Q99M85 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Scrt1Q99M85 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
Scrt1Q99M85 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Scrt1Q99M85 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Scrt1Q99M85 Gm24891-201ENSMUST00000104391 136 ntBASIC10.46□□□□□ -0.73
Scrt1Q99M85 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.46□□□□□ -0.73
Scrt1Q99M85 Gm8199-201ENSMUST00000121323 823 ntBASIC10.46□□□□□ -0.73
Scrt1Q99M85 Gm12628-201ENSMUST00000122193 382 ntBASIC10.46□□□□□ -0.73
Scrt1Q99M85 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Scrt1Q99M85 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Scrt1Q99M85 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC10.46□□□□□ -0.73
Scrt1Q99M85 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC10.46□□□□□ -0.73
Scrt1Q99M85 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Scrt1Q99M85 Mir6998-201ENSMUST00000183343 64 ntBASIC10.46□□□□□ -0.73
Scrt1Q99M85 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.46□□□□□ -0.73
Scrt1Q99M85 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Scrt1Q99M85 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC10.46□□□□□ -0.73
Scrt1Q99M85 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.46□□□□□ -0.73
Scrt1Q99M85 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.46□□□□□ -0.73
Scrt1Q99M85 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Scrt1Q99M85 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.74
Scrt1Q99M85 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Scrt1Q99M85 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Scrt1Q99M85 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Scrt1Q99M85 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Scrt1Q99M85 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Scrt1Q99M85 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Scrt1Q99M85 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.46□□□□□ -0.74
Scrt1Q99M85 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Scrt1Q99M85 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.46□□□□□ -0.74
Scrt1Q99M85 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.46□□□□□ -0.74
Scrt1Q99M85 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Scrt1Q99M85 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Scrt1Q99M85 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Scrt1Q99M85 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
Scrt1Q99M85 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Scrt1Q99M85 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Scrt1Q99M85 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Scrt1Q99M85 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Scrt1Q99M85 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Scrt1Q99M85 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Scrt1Q99M85 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Scrt1Q99M85 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.45□□□□□ -0.74
Scrt1Q99M85 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.45□□□□□ -0.74
Scrt1Q99M85 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.45□□□□□ -0.74
Scrt1Q99M85 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.45□□□□□ -0.74
Scrt1Q99M85 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.45□□□□□ -0.74
Scrt1Q99M85 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Gm3765-201ENSMUST00000130985 1447 ntBASIC10.45□□□□□ -0.74
Scrt1Q99M85 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Gm13809-201ENSMUST00000117921 597 ntBASIC10.45□□□□□ -0.74
Scrt1Q99M85 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC10.45□□□□□ -0.74
Scrt1Q99M85 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Gm22144-201ENSMUST00000157402 102 ntBASIC10.45□□□□□ -0.74
Scrt1Q99M85 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Scrt1Q99M85 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Scrt1Q99M85 Gm9022-201ENSMUST00000182482 992 ntBASIC10.45□□□□□ -0.74
Scrt1Q99M85 Gm6771-201ENSMUST00000182716 1001 ntBASIC10.45□□□□□ -0.74
Scrt1Q99M85 Gm18304-201ENSMUST00000189162 546 ntBASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms