Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.98□□□□□ -0.49
Cdk9Q99J95 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.98□□□□□ -0.49
Cdk9Q99J95 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.97□□□□□ -0.49
Cdk9Q99J95 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.97□□□□□ -0.49
Cdk9Q99J95 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cdk9Q99J95 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Gm13315-201ENSMUST00000120376 991 ntBASIC11.97□□□□□ -0.49
Cdk9Q99J95 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdk9Q99J95 AY702102-202ENSMUST00000194651 1173 ntBASIC11.97□□□□□ -0.49
Cdk9Q99J95 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdk9Q99J95 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.97□□□□□ -0.49
Cdk9Q99J95 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.97□□□□□ -0.49
Cdk9Q99J95 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Cdk9Q99J95 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cdk9Q99J95 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk9Q99J95 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk9Q99J95 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk9Q99J95 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk9Q99J95 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk9Q99J95 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk9Q99J95 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk9Q99J95 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk9Q99J95 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.96□□□□□ -0.49
Cdk9Q99J95 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.96□□□□□ -0.49
Cdk9Q99J95 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk9Q99J95 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk9Q99J95 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk9Q99J95 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cdk9Q99J95 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk9Q99J95 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk9Q99J95 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk9Q99J95 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
Cdk9Q99J95 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
Cdk9Q99J95 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.96□□□□□ -0.49
Cdk9Q99J95 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk9Q99J95 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk9Q99J95 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.96□□□□□ -0.49
Cdk9Q99J95 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk9Q99J95 Gm8018-201ENSMUST00000173536 789 ntBASIC11.96□□□□□ -0.49
Cdk9Q99J95 Gm4271-201ENSMUST00000174444 973 ntBASIC11.96□□□□□ -0.49
Cdk9Q99J95 Gm27731-201ENSMUST00000185192 107 ntBASIC11.96□□□□□ -0.49
Cdk9Q99J95 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk9Q99J95 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk9Q99J95 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms