Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Thumpd1Q99J36 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.59□□□□□ -0.71
Thumpd1Q99J36 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Thumpd1Q99J36 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.71
Thumpd1Q99J36 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.71
Thumpd1Q99J36 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Gm16379-201ENSMUST00000161469 348 ntBASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Gm3890-201ENSMUST00000182416 207 ntBASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Gm28882-201ENSMUST00000185504 314 ntBASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Gm8762-201ENSMUST00000193486 339 ntBASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Gm43818-201ENSMUST00000200605 466 ntBASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Thumpd1Q99J36 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.58□□□□□ -0.72
Thumpd1Q99J36 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Gm16177-201ENSMUST00000120728 718 ntBASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Gm7809-201ENSMUST00000153199 742 ntBASIC10.57□□□□□ -0.72
Thumpd1Q99J36 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.57□□□□□ -0.72
Thumpd1Q99J36 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thumpd1Q99J36 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.56□□□□□ -0.72
Thumpd1Q99J36 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thumpd1Q99J36 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thumpd1Q99J36 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Thumpd1Q99J36 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Thumpd1Q99J36 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thumpd1Q99J36 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thumpd1Q99J36 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms