Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm11978-201ENSMUST00000122315 466 ntBASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Gm27331-201ENSMUST00000183705 60 ntBASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Gm18717-201ENSMUST00000192744 1241 ntBASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Gm29705-201ENSMUST00000212598 474 ntBASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 AC154683.1-201ENSMUST00000228409 1284 ntBASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Gm11618-201ENSMUST00000117946 267 ntBASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Gm6007-201ENSMUST00000208170 823 ntBASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 AC153932.1-201ENSMUST00000218558 787 ntBASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 AC139323.1-201ENSMUST00000223370 1040 ntBASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb3Q91XZ7 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Mir1192-201ENSMUST00000116976 121 ntBASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Gm12073-201ENSMUST00000117382 524 ntBASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Gm27514-201ENSMUST00000183692 110 ntBASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Gm21118-202ENSMUST00000187418 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms