Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm14130-201ENSMUST00000118417 987 ntBASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Gm26083-201ENSMUST00000157904 193 ntBASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Gm7003-201ENSMUST00000195089 312 ntBASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Gm45433-201ENSMUST00000209386 247 ntBASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Gm270-201ENSMUST00000223010 976 ntBASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Gm24749-201ENSMUST00000157838 343 ntBASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Gm2553-201ENSMUST00000215986 605 ntBASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Gm9797-202ENSMUST00000218003 294 ntBASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb6Q91XZ4 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Gm23949-201ENSMUST00000104027 127 ntBASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Gm4310-201ENSMUST00000177847 889 ntBASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Gm43184-201ENSMUST00000197247 542 ntBASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Gm6450-201ENSMUST00000200896 574 ntBASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms