Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga11Q91XY8 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga11Q91XY8 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.56□□□□□ -0.56
Pcdhga11Q91XY8 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga11Q91XY8 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.56□□□□□ -0.56
Pcdhga11Q91XY8 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga11Q91XY8 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.56□□□□□ -0.56
Pcdhga11Q91XY8 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga11Q91XY8 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Pcdhga11Q91XY8 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.56□□□□□ -0.56
Pcdhga11Q91XY8 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga11Q91XY8 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.56□□□□□ -0.56
Pcdhga11Q91XY8 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Gm14247-201ENSMUST00000120950 237 ntBASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Gm14381-201ENSMUST00000122105 414 ntBASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Gm6621-201ENSMUST00000193251 772 ntBASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga11Q91XY8 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Gm24845-201ENSMUST00000158034 109 ntBASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Gm26956-201ENSMUST00000182176 986 ntBASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Gm38241-201ENSMUST00000192641 898 ntBASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga11Q91XY8 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms