Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 1700013D24Rik-201ENSMUST00000112537 535 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Gm15198-201ENSMUST00000117283 177 ntBASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Gm13297-201ENSMUST00000120205 934 ntBASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Gm13342-201ENSMUST00000121055 207 ntBASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Gm11827-201ENSMUST00000142297 1257 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Milr1-203ENSMUST00000147326 1234 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Gm8321-201ENSMUST00000181691 980 ntBASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Gm38254-201ENSMUST00000192276 1009 ntBASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Gm6007-201ENSMUST00000208170 823 ntBASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb17Q91VD8 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Gm24231-201ENSMUST00000104315 133 ntBASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Gm12058-201ENSMUST00000118614 437 ntBASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Gm13315-201ENSMUST00000120376 991 ntBASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Gm13118-201ENSMUST00000120402 549 ntBASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Gm14054-201ENSMUST00000120744 704 ntBASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Gm14612-201ENSMUST00000121522 881 ntBASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Rmrp-201ENSMUST00000157463 271 ntBASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Gm26069-201ENSMUST00000157497 277 ntBASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Arhgef38-204ENSMUST00000161932 1033 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Gm6555-201ENSMUST00000195167 789 ntBASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Gm42599-201ENSMUST00000201308 469 ntBASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Nps-203ENSMUST00000210907 1206 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Gm18935-201ENSMUST00000212692 664 ntBASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Morn2-202ENSMUST00000227729 656 ntBASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms