Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TraipQ8VIG6 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
TraipQ8VIG6 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TraipQ8VIG6 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.77□□□□□ -0.37
TraipQ8VIG6 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TraipQ8VIG6 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TraipQ8VIG6 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TraipQ8VIG6 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Gm15566-201ENSMUST00000121130 590 ntBASIC12.76□□□□□ -0.37
TraipQ8VIG6 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Gm14603-201ENSMUST00000121275 448 ntBASIC12.76□□□□□ -0.37
TraipQ8VIG6 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TraipQ8VIG6 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Gm23045-201ENSMUST00000175041 96 ntBASIC12.76□□□□□ -0.37
TraipQ8VIG6 Gm10807-201ENSMUST00000177134 795 ntBASIC12.76□□□□□ -0.37
TraipQ8VIG6 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC12.76□□□□□ -0.37
TraipQ8VIG6 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.76□□□□□ -0.37
TraipQ8VIG6 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.76□□□□□ -0.37
TraipQ8VIG6 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TraipQ8VIG6 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.76□□□□□ -0.37
TraipQ8VIG6 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TraipQ8VIG6 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.76□□□□□ -0.37
TraipQ8VIG6 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.76□□□□□ -0.37
TraipQ8VIG6 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TraipQ8VIG6 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Gm14585-201ENSMUST00000120713 634 ntBASIC12.75□□□□□ -0.37
TraipQ8VIG6 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC12.75□□□□□ -0.37
TraipQ8VIG6 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.75□□□□□ -0.37
TraipQ8VIG6 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Gm21092-201ENSMUST00000178995 955 ntBASIC12.75□□□□□ -0.37
TraipQ8VIG6 Gm44506-201ENSMUST00000206278 965 ntBASIC12.75□□□□□ -0.37
TraipQ8VIG6 Gm44551-201ENSMUST00000208804 171 ntBASIC12.75□□□□□ -0.37
TraipQ8VIG6 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.75□□□□□ -0.37
TraipQ8VIG6 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TraipQ8VIG6 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TraipQ8VIG6 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms