Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Gm11531-201ENSMUST00000117614 555 ntBASIC12.28□□□□□ -0.44
Trim60Q8VI40 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Mir1982-201ENSMUST00000157368 74 ntBASIC12.28□□□□□ -0.44
Trim60Q8VI40 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Trim60Q8VI40 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Gm9230-201ENSMUST00000188228 532 ntBASIC12.28□□□□□ -0.44
Trim60Q8VI40 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim60Q8VI40 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Gm38158-201ENSMUST00000194617 339 ntBASIC12.28□□□□□ -0.44
Trim60Q8VI40 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.28□□□□□ -0.44
Trim60Q8VI40 Gm43630-201ENSMUST00000201550 776 ntBASIC12.28□□□□□ -0.44
Trim60Q8VI40 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.28□□□□□ -0.44
Trim60Q8VI40 Morn2-202ENSMUST00000227729 656 ntBASIC12.28□□□□□ -0.44
Trim60Q8VI40 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim60Q8VI40 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.28□□□□□ -0.44
Trim60Q8VI40 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.28□□□□□ -0.44
Trim60Q8VI40 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trim60Q8VI40 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.27□□□□□ -0.44
Trim60Q8VI40 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim60Q8VI40 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim60Q8VI40 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.27□□□□□ -0.44
Trim60Q8VI40 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trim60Q8VI40 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim60Q8VI40 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.27□□□□□ -0.44
Trim60Q8VI40 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim60Q8VI40 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim60Q8VI40 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim60Q8VI40 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim60Q8VI40 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trim60Q8VI40 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.27□□□□□ -0.45
Trim60Q8VI40 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim60Q8VI40 Gm12164-201ENSMUST00000121695 551 ntBASIC12.27□□□□□ -0.45
Trim60Q8VI40 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim60Q8VI40 Gm26956-201ENSMUST00000182176 986 ntBASIC12.27□□□□□ -0.45
Trim60Q8VI40 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.27□□□□□ -0.45
Trim60Q8VI40 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.27□□□□□ -0.45
Trim60Q8VI40 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.27□□□□□ -0.45
Trim60Q8VI40 Gm7046-201ENSMUST00000221351 977 ntBASIC12.27□□□□□ -0.45
Trim60Q8VI40 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.27□□□□□ -0.45
Trim60Q8VI40 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim60Q8VI40 Gm10312-201ENSMUST00000078515 489 ntBASIC12.27□□□□□ -0.45
Trim60Q8VI40 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim60Q8VI40 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim60Q8VI40 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim60Q8VI40 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim60Q8VI40 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim60Q8VI40 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim60Q8VI40 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim60Q8VI40 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.27□□□□□ -0.45
Trim60Q8VI40 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trim60Q8VI40 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim60Q8VI40 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim60Q8VI40 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim60Q8VI40 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim60Q8VI40 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim60Q8VI40 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim60Q8VI40 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim60Q8VI40 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim60Q8VI40 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim60Q8VI40 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.26□□□□□ -0.45
Trim60Q8VI40 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim60Q8VI40 Gm7722-201ENSMUST00000120646 741 ntBASIC12.26□□□□□ -0.45
Trim60Q8VI40 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim60Q8VI40 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim60Q8VI40 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim60Q8VI40 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim60Q8VI40 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim60Q8VI40 Gm37489-201ENSMUST00000191883 159 ntBASIC12.26□□□□□ -0.45
Trim60Q8VI40 Gm38002-201ENSMUST00000193255 180 ntBASIC12.26□□□□□ -0.45
Trim60Q8VI40 Gm18893-201ENSMUST00000198416 943 ntBASIC12.26□□□□□ -0.45
Trim60Q8VI40 Gm43002-201ENSMUST00000200310 155 ntBASIC12.26□□□□□ -0.45
Trim60Q8VI40 Gm6013-201ENSMUST00000212264 699 ntBASIC12.26□□□□□ -0.45
Trim60Q8VI40 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.26□□□□□ -0.45
Trim60Q8VI40 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim60Q8VI40 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim60Q8VI40 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim60Q8VI40 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim60Q8VI40 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim60Q8VI40 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim60Q8VI40 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim60Q8VI40 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms