Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Gm9368-201ENSMUST00000219348 831 ntBASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.91□□□□□ -0.5
Vps39Q8R5L3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Gm27501-201ENSMUST00000183599 107 ntBASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Gm19187-201ENSMUST00000206781 892 ntBASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.9□□□□□ -0.5
Vps39Q8R5L3 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Vps39Q8R5L3 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Vps39Q8R5L3 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Vps39Q8R5L3 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Gm11930-201ENSMUST00000117788 190 ntBASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Gm6114-201ENSMUST00000182472 968 ntBASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Mir7085-201ENSMUST00000184353 66 ntBASIC11.89□□□□□ -0.51
Vps39Q8R5L3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Gm18893-201ENSMUST00000198416 943 ntBASIC11.89□□□□□ -0.51
Vps39Q8R5L3 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.89□□□□□ -0.51
Vps39Q8R5L3 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms