Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Gm29615-201ENSMUST00000185371 697 ntBASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Gm28224-201ENSMUST00000186078 697 ntBASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Gm29001-201ENSMUST00000186177 697 ntBASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Gm28292-201ENSMUST00000186593 697 ntBASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Gm28101-201ENSMUST00000187608 697 ntBASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Gm29076-201ENSMUST00000187689 697 ntBASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Gm28302-201ENSMUST00000187931 697 ntBASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Gm28646-201ENSMUST00000188220 697 ntBASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Gm28205-201ENSMUST00000189177 697 ntBASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Gm29032-201ENSMUST00000189797 697 ntBASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Gm28695-201ENSMUST00000190300 697 ntBASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Gm37448-201ENSMUST00000192795 697 ntBASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Gm37666-201ENSMUST00000194110 866 ntBASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Gm3836-201ENSMUST00000211377 1613 ntBASIC14.19□□□□□ -0.14
Top1mtQ8R4U6 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Gm14130-201ENSMUST00000118417 987 ntBASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Gm11700-201ENSMUST00000119409 403 ntBASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Gm45433-201ENSMUST00000209386 247 ntBASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 AC126257.2-201ENSMUST00000215507 2300 ntBASIC14.18□□□□□ -0.14
Top1mtQ8R4U6 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Top1mtQ8R4U6 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Top1mtQ8R4U6 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC14.17□□□□□ -0.14
Top1mtQ8R4U6 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Top1mtQ8R4U6 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms