Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c5Q8R2T8 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Gtf3c5Q8R2T8 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c5Q8R2T8 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.2□□□□□ -0.14
Gtf3c5Q8R2T8 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.2□□□□□ -0.14
Gtf3c5Q8R2T8 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c5Q8R2T8 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c5Q8R2T8 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Gtf3c5Q8R2T8 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gtf3c5Q8R2T8 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c5Q8R2T8 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c5Q8R2T8 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Gtf3c5Q8R2T8 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Gm19445-201ENSMUST00000193649 2438 ntBASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Gm13296-201ENSMUST00000117854 997 ntBASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Sectm1a-201ENSMUST00000026162 1692 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Rpl7l1-201ENSMUST00000078286 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Kirrel3-205ENSMUST00000187182 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c5Q8R2T8 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Gm27390-201ENSMUST00000184516 176 ntBASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Gm38241-201ENSMUST00000192641 898 ntBASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c5Q8R2T8 Kirrel3-208ENSMUST00000188933 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gtf3c5Q8R2T8 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gtf3c5Q8R2T8 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Gtf3c5Q8R2T8 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gtf3c5Q8R2T8 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Gtf3c5Q8R2T8 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gtf3c5Q8R2T8 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gtf3c5Q8R2T8 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gtf3c5Q8R2T8 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gtf3c5Q8R2T8 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Gtf3c5Q8R2T8 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gtf3c5Q8R2T8 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gtf3c5Q8R2T8 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Gtf3c5Q8R2T8 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms