Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Gm5451-201ENSMUST00000080545 579 ntBASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Gm24398-201ENSMUST00000157870 109 ntBASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 n-R5s211-201ENSMUST00000093689 119 ntBASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Gm27196-201ENSMUST00000184787 2582 ntBASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp7Q8R1T1 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Gm23272-201ENSMUST00000104053 129 ntBASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Rn7s6-201ENSMUST00000175005 291 ntBASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Gm10807-201ENSMUST00000177134 795 ntBASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Gm44292-201ENSMUST00000205194 2364 ntBASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Gm44758-201ENSMUST00000206096 2068 ntBASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp7Q8R1T1 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms