Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cnot3Q8K0V4 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cnot3Q8K0V4 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cnot3Q8K0V4 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cnot3Q8K0V4 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cnot3Q8K0V4 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cnot3Q8K0V4 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cnot3Q8K0V4 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cnot3Q8K0V4 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cnot3Q8K0V4 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cnot3Q8K0V4 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cnot3Q8K0V4 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cnot3Q8K0V4 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.13□□□□□ -0.63
Cnot3Q8K0V4 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cnot3Q8K0V4 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cnot3Q8K0V4 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cnot3Q8K0V4 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.13□□□□□ -0.63
Cnot3Q8K0V4 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cnot3Q8K0V4 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cnot3Q8K0V4 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Gm15610-201ENSMUST00000120584 195 ntBASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Gm6180-201ENSMUST00000065243 498 ntBASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cnot3Q8K0V4 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Gm14999-201ENSMUST00000121039 624 ntBASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Gm38241-201ENSMUST00000192641 898 ntBASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cnot3Q8K0V4 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms