Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ShfQ8CG80 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ShfQ8CG80 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.57□□□□□ -0.72
ShfQ8CG80 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.57□□□□□ -0.72
ShfQ8CG80 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ShfQ8CG80 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ShfQ8CG80 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ShfQ8CG80 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ShfQ8CG80 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.57□□□□□ -0.72
ShfQ8CG80 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
ShfQ8CG80 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
ShfQ8CG80 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ShfQ8CG80 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ShfQ8CG80 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ShfQ8CG80 Gm13829-201ENSMUST00000119600 138 ntBASIC10.57□□□□□ -0.72
ShfQ8CG80 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ShfQ8CG80 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.57□□□□□ -0.72
ShfQ8CG80 Gm26956-201ENSMUST00000182176 986 ntBASIC10.57□□□□□ -0.72
ShfQ8CG80 Gm19187-201ENSMUST00000206781 892 ntBASIC10.57□□□□□ -0.72
ShfQ8CG80 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ShfQ8CG80 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.57□□□□□ -0.72
ShfQ8CG80 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.57□□□□□ -0.72
ShfQ8CG80 Gm8712-201ENSMUST00000221090 701 ntBASIC10.57□□□□□ -0.72
ShfQ8CG80 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.57□□□□□ -0.72
ShfQ8CG80 Gm807-202ENSMUST00000224929 408 ntBASIC10.57□□□□□ -0.72
ShfQ8CG80 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ShfQ8CG80 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ShfQ8CG80 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ShfQ8CG80 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ShfQ8CG80 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ShfQ8CG80 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.57□□□□□ -0.72
ShfQ8CG80 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ShfQ8CG80 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
ShfQ8CG80 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.57□□□□□ -0.72
ShfQ8CG80 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ShfQ8CG80 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.57□□□□□ -0.72
ShfQ8CG80 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.57□□□□□ -0.72
ShfQ8CG80 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
ShfQ8CG80 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.56□□□□□ -0.72
ShfQ8CG80 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.56□□□□□ -0.72
ShfQ8CG80 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.56□□□□□ -0.72
ShfQ8CG80 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.56□□□□□ -0.72
ShfQ8CG80 Rgr-203ENSMUST00000225070 4704 ntBASIC10.56□□□□□ -0.72
ShfQ8CG80 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
ShfQ8CG80 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.56□□□□□ -0.72
ShfQ8CG80 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
ShfQ8CG80 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.56□□□□□ -0.72
ShfQ8CG80 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.56□□□□□ -0.72
ShfQ8CG80 Gm11511-201ENSMUST00000118146 540 ntBASIC10.56□□□□□ -0.72
ShfQ8CG80 Gm11425-201ENSMUST00000119608 498 ntBASIC10.56□□□□□ -0.72
ShfQ8CG80 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.56□□□□□ -0.72
ShfQ8CG80 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.56□□□□□ -0.72
ShfQ8CG80 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.56□□□□□ -0.72
ShfQ8CG80 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
ShfQ8CG80 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.56□□□□□ -0.72
ShfQ8CG80 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.56□□□□□ -0.72
ShfQ8CG80 Gm8956-201ENSMUST00000203939 825 ntBASIC10.56□□□□□ -0.72
ShfQ8CG80 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.56□□□□□ -0.72
ShfQ8CG80 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.56□□□□□ -0.72
ShfQ8CG80 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Gm10254-201ENSMUST00000052888 867 ntBASIC10.56□□□□□ -0.72
ShfQ8CG80 Gm9396-201ENSMUST00000076703 567 ntBASIC10.56□□□□□ -0.72
ShfQ8CG80 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
ShfQ8CG80 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
ShfQ8CG80 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.56□□□□□ -0.72
ShfQ8CG80 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.56□□□□□ -0.72
ShfQ8CG80 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
ShfQ8CG80 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.56□□□□□ -0.72
ShfQ8CG80 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.56□□□□□ -0.72
ShfQ8CG80 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
ShfQ8CG80 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms