Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nup88Q8CEC0 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Gm14644-201ENSMUST00000116671 647 ntBASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.04□□□□□ -0.16
Nup88Q8CEC0 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC14.04□□□□□ -0.16
Nup88Q8CEC0 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Gm37666-201ENSMUST00000194110 866 ntBASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Gm42997-202ENSMUST00000200321 985 ntBASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Gm19187-201ENSMUST00000206781 892 ntBASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Gm45776-201ENSMUST00000212366 1522 ntBASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nup88Q8CEC0 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nup88Q8CEC0 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup88Q8CEC0 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup88Q8CEC0 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup88Q8CEC0 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nup88Q8CEC0 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup88Q8CEC0 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.02□□□□□ -0.16
Nup88Q8CEC0 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup88Q8CEC0 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms