Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Shisa4Q8CA71 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.75□□□□□ -0.21
Shisa4Q8CA71 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa4Q8CA71 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa4Q8CA71 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Gm13916-201ENSMUST00000117368 628 ntBASIC13.74□□□□□ -0.21
Shisa4Q8CA71 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Gm24844-201ENSMUST00000158679 127 ntBASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Mir7686-201ENSMUST00000200604 57 ntBASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.74□□□□□ -0.21
Shisa4Q8CA71 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa4Q8CA71 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Gm24891-201ENSMUST00000104391 136 ntBASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Gm12029-201ENSMUST00000120073 832 ntBASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Gm15432-201ENSMUST00000121106 195 ntBASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Mir8115-201ENSMUST00000184992 119 ntBASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Gm29155-201ENSMUST00000185910 269 ntBASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa4Q8CA71 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Gm44573-201ENSMUST00000191753 2370 ntBASIC13.72□□□□□ -0.21
Shisa4Q8CA71 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Gm15566-201ENSMUST00000121130 590 ntBASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Gm8365-201ENSMUST00000197334 648 ntBASIC13.72□□□□□ -0.21
Shisa4Q8CA71 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms