Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Gm4310-201ENSMUST00000177847 889 ntBASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Gm43184-201ENSMUST00000197247 542 ntBASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Gm9797-202ENSMUST00000218003 294 ntBASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Gm12380-201ENSMUST00000119012 544 ntBASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Gm2553-201ENSMUST00000215986 605 ntBASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Gm270-201ENSMUST00000223010 976 ntBASIC13.07□□□□□ -0.32
Trim9Q8C7M3 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim9Q8C7M3 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Gm23949-201ENSMUST00000104027 127 ntBASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms