Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Gm12266-201ENSMUST00000120311 962 ntBASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Gm12196-201ENSMUST00000120954 262 ntBASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Gm25881-201ENSMUST00000157783 103 ntBASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Gm8146-201ENSMUST00000192106 1847 ntBASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc60Q8C4J0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Mir6927-201ENSMUST00000184494 71 ntBASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Gm38117-201ENSMUST00000194653 939 ntBASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 AU022133-201ENSMUST00000200601 873 ntBASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc60Q8C4J0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Gm38194-201ENSMUST00000194529 2211 ntBASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Gm43760-201ENSMUST00000202120 3015 ntBASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 H2-Q3-201ENSMUST00000172583 608 ntBASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Gm25732-201ENSMUST00000175168 60 ntBASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Gm18986-201ENSMUST00000216029 1986 ntBASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc60Q8C4J0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms