Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Gm27627-201ENSMUST00000183644 150 ntBASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Gm37666-201ENSMUST00000194110 866 ntBASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Gm17827-201ENSMUST00000211825 742 ntBASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.24□□□□□ -0.45
Trub1Q8C0D0 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Gm8343-201ENSMUST00000182705 994 ntBASIC12.23□□□□□ -0.45
Trub1Q8C0D0 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Gm29615-201ENSMUST00000185371 697 ntBASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Gm28224-201ENSMUST00000186078 697 ntBASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Gm29001-201ENSMUST00000186177 697 ntBASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Gm28292-201ENSMUST00000186593 697 ntBASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Gm28101-201ENSMUST00000187608 697 ntBASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Gm29076-201ENSMUST00000187689 697 ntBASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Gm28302-201ENSMUST00000187931 697 ntBASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Gm28646-201ENSMUST00000188220 697 ntBASIC12.23□□□□□ -0.45
Trub1Q8C0D0 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Gm28205-201ENSMUST00000189177 697 ntBASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Gm29032-201ENSMUST00000189797 697 ntBASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Gm28695-201ENSMUST00000190300 697 ntBASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Gm37448-201ENSMUST00000192795 697 ntBASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Paupar-201ENSMUST00000194826 3482 ntBASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trub1Q8C0D0 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trub1Q8C0D0 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms