Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm9132-201ENSMUST00000210182 832 ntBASIC16.69■□□□□ 0.26
Usp47Q8BY87 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp47Q8BY87 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Usp47Q8BY87 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp47Q8BY87 Olfr584-201ENSMUST00000098210 964 ntBASIC16.69■□□□□ 0.26
Usp47Q8BY87 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Usp47Q8BY87 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Usp47Q8BY87 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp47Q8BY87 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Usp47Q8BY87 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Usp47Q8BY87 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp47Q8BY87 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Usp47Q8BY87 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp47Q8BY87 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Usp47Q8BY87 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Usp47Q8BY87 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Usp47Q8BY87 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp47Q8BY87 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp47Q8BY87 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp47Q8BY87 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp47Q8BY87 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp47Q8BY87 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Usp47Q8BY87 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Usp47Q8BY87 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp47Q8BY87 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Usp47Q8BY87 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp47Q8BY87 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC16.68■□□□□ 0.26
Usp47Q8BY87 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Usp47Q8BY87 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC16.68■□□□□ 0.26
Usp47Q8BY87 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Usp47Q8BY87 Gm19459-201ENSMUST00000176240 835 ntBASIC16.68■□□□□ 0.26
Usp47Q8BY87 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC16.68■□□□□ 0.26
Usp47Q8BY87 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp47Q8BY87 Lect2-202ENSMUST00000225183 823 ntBASIC16.68■□□□□ 0.26
Usp47Q8BY87 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp47Q8BY87 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Usp47Q8BY87 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp47Q8BY87 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp47Q8BY87 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC16.68■□□□□ 0.26
Usp47Q8BY87 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp47Q8BY87 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Usp47Q8BY87 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Usp47Q8BY87 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp47Q8BY87 Gm3836-201ENSMUST00000211377 1613 ntBASIC16.68■□□□□ 0.26
Usp47Q8BY87 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp47Q8BY87 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp47Q8BY87 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp47Q8BY87 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp47Q8BY87 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp47Q8BY87 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp47Q8BY87 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC16.67■□□□□ 0.26
Usp47Q8BY87 Mir7032-201ENSMUST00000185154 79 ntBASIC16.67■□□□□ 0.26
Usp47Q8BY87 Gm17825-201ENSMUST00000206836 794 ntBASIC16.67■□□□□ 0.26
Usp47Q8BY87 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC16.67■□□□□ 0.26
Usp47Q8BY87 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp47Q8BY87 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Usp47Q8BY87 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp47Q8BY87 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp47Q8BY87 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp47Q8BY87 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp47Q8BY87 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp47Q8BY87 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp47Q8BY87 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp47Q8BY87 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp47Q8BY87 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Usp47Q8BY87 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC16.67■□□□□ 0.26
Usp47Q8BY87 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC16.67■□□□□ 0.26
Usp47Q8BY87 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp47Q8BY87 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp47Q8BY87 AC166836.1-201ENSMUST00000219933 1795 ntBASIC16.67■□□□□ 0.26
Usp47Q8BY87 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp47Q8BY87 Gm1995-201ENSMUST00000220838 2602 ntBASIC16.66■□□□□ 0.26
Usp47Q8BY87 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp47Q8BY87 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Usp47Q8BY87 Gm11667-201ENSMUST00000119828 486 ntBASIC16.66■□□□□ 0.26
Usp47Q8BY87 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp47Q8BY87 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp47Q8BY87 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
Usp47Q8BY87 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp47Q8BY87 Gm7504-201ENSMUST00000201449 424 ntBASIC16.66■□□□□ 0.26
Usp47Q8BY87 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Usp47Q8BY87 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC16.66■□□□□ 0.26
Usp47Q8BY87 Gm9463-201ENSMUST00000206707 601 ntBASIC16.66■□□□□ 0.26
Usp47Q8BY87 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC16.66■□□□□ 0.26
Usp47Q8BY87 Gm45398-201ENSMUST00000210561 165 ntBASIC16.66■□□□□ 0.26
Usp47Q8BY87 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp47Q8BY87 AC153505.1-201ENSMUST00000218819 1071 ntBASIC16.66■□□□□ 0.26
Usp47Q8BY87 AC118639.2-201ENSMUST00000226289 223 ntBASIC16.66■□□□□ 0.26
Usp47Q8BY87 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Usp47Q8BY87 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Usp47Q8BY87 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp47Q8BY87 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp47Q8BY87 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp47Q8BY87 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp47Q8BY87 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC16.66■□□□□ 0.26
Usp47Q8BY87 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp47Q8BY87 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp47Q8BY87 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp47Q8BY87 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Usp47Q8BY87 AC155298.2-201ENSMUST00000225485 6226 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms