Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Gm9630-201ENSMUST00000178304 885 ntBASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Gm38241-201ENSMUST00000192641 898 ntBASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Gm24136-201ENSMUST00000083374 165 ntBASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 AC121870.2-201ENSMUST00000214343 1870 ntBASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Gm25668-201ENSMUST00000157700 129 ntBASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Gm17376-201ENSMUST00000166016 84 ntBASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Gm4857-201ENSMUST00000192718 785 ntBASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trerf1Q8BXJ2 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Gm23270-201ENSMUST00000104055 131 ntBASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Gm24845-201ENSMUST00000158034 109 ntBASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Gm23119-201ENSMUST00000158610 140 ntBASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Gm28882-201ENSMUST00000185504 314 ntBASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trerf1Q8BXJ2 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 250.8 ms