Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Gm28424-201ENSMUST00000187393 1319 ntBASIC16.6■□□□□ 0.25
Usp54Q8BL06 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp54Q8BL06 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Gm3828-201ENSMUST00000121817 257 ntBASIC16.6■□□□□ 0.25
Usp54Q8BL06 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Gm9162-201ENSMUST00000182081 991 ntBASIC16.6■□□□□ 0.25
Usp54Q8BL06 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp54Q8BL06 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp54Q8BL06 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp54Q8BL06 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp54Q8BL06 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC16.59■□□□□ 0.25
Usp54Q8BL06 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp54Q8BL06 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Usp54Q8BL06 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Usp54Q8BL06 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp54Q8BL06 Gm43760-201ENSMUST00000202120 3015 ntBASIC16.59■□□□□ 0.25
Usp54Q8BL06 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp54Q8BL06 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp54Q8BL06 Snord23-201ENSMUST00000116828 109 ntBASIC16.59■□□□□ 0.25
Usp54Q8BL06 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp54Q8BL06 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC16.59■□□□□ 0.25
Usp54Q8BL06 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Usp54Q8BL06 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Usp54Q8BL06 Gm43249-201ENSMUST00000200464 458 ntBASIC16.59■□□□□ 0.25
Usp54Q8BL06 Gm44814-201ENSMUST00000207018 434 ntBASIC16.59■□□□□ 0.25
Usp54Q8BL06 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp54Q8BL06 AC162932.1-201ENSMUST00000219209 872 ntBASIC16.59■□□□□ 0.25
Usp54Q8BL06 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp54Q8BL06 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp54Q8BL06 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp54Q8BL06 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp54Q8BL06 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp54Q8BL06 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp54Q8BL06 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC16.58■□□□□ 0.25
Usp54Q8BL06 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Usp54Q8BL06 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Usp54Q8BL06 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Usp54Q8BL06 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp54Q8BL06 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp54Q8BL06 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp54Q8BL06 Gm42928-201ENSMUST00000197338 3339 ntBASIC16.58■□□□□ 0.24
Usp54Q8BL06 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC16.58■□□□□ 0.24
Usp54Q8BL06 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC16.58■□□□□ 0.24
Usp54Q8BL06 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp54Q8BL06 Gm8451-201ENSMUST00000170338 447 ntBASIC16.58■□□□□ 0.24
Usp54Q8BL06 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp54Q8BL06 Gm37365-201ENSMUST00000193109 409 ntBASIC16.58■□□□□ 0.24
Usp54Q8BL06 Gm44008-201ENSMUST00000204345 412 ntBASIC16.58■□□□□ 0.24
Usp54Q8BL06 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC16.58■□□□□ 0.24
Usp54Q8BL06 Gm7536-201ENSMUST00000077389 444 ntBASIC16.58■□□□□ 0.24
Usp54Q8BL06 Gm5453-201ENSMUST00000080866 447 ntBASIC16.58■□□□□ 0.24
Usp54Q8BL06 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC16.58■□□□□ 0.24
Usp54Q8BL06 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Usp54Q8BL06 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp54Q8BL06 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp54Q8BL06 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp54Q8BL06 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp54Q8BL06 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Usp54Q8BL06 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp54Q8BL06 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Usp54Q8BL06 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp54Q8BL06 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp54Q8BL06 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp54Q8BL06 Gm19680-201ENSMUST00000095050 1513 ntBASIC16.58■□□□□ 0.24
Usp54Q8BL06 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp54Q8BL06 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp54Q8BL06 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp54Q8BL06 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Usp54Q8BL06 AC164107.1-201ENSMUST00000227730 2161 ntBASIC16.57■□□□□ 0.24
Usp54Q8BL06 Gm22594-201ENSMUST00000104251 130 ntBASIC16.57■□□□□ 0.24
Usp54Q8BL06 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Usp54Q8BL06 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Usp54Q8BL06 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Usp54Q8BL06 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp54Q8BL06 Gm26272-201ENSMUST00000179241 132 ntBASIC16.57■□□□□ 0.24
Usp54Q8BL06 Gm2448-201ENSMUST00000207080 559 ntBASIC16.57■□□□□ 0.24
Usp54Q8BL06 AC158388.3-202ENSMUST00000225517 775 ntBASIC16.57■□□□□ 0.24
Usp54Q8BL06 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp54Q8BL06 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Usp54Q8BL06 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp54Q8BL06 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Usp54Q8BL06 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp54Q8BL06 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC16.57■□□□□ 0.24
Usp54Q8BL06 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Usp54Q8BL06 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Usp54Q8BL06 Gm18210-201ENSMUST00000209001 1524 ntBASIC16.57■□□□□ 0.24
Usp54Q8BL06 Gm37122-201ENSMUST00000195313 1567 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms