Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdhr3Q8BL00 Gm8420-201ENSMUST00000097103 598 ntBASIC10.37□□□□□ -0.75
Cdhr3Q8BL00 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Cdhr3Q8BL00 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Cdhr3Q8BL00 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdhr3Q8BL00 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Cdhr3Q8BL00 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdhr3Q8BL00 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdhr3Q8BL00 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdhr3Q8BL00 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cdhr3Q8BL00 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Cdhr3Q8BL00 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdhr3Q8BL00 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdhr3Q8BL00 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdhr3Q8BL00 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdhr3Q8BL00 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Gm5950-201ENSMUST00000213337 772 ntBASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Cdhr3Q8BL00 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Gm11700-201ENSMUST00000119409 403 ntBASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Gm18893-201ENSMUST00000198416 943 ntBASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Gm43002-201ENSMUST00000200310 155 ntBASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Rgr-203ENSMUST00000225070 4704 ntBASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms