Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Gm11246-201ENSMUST00000120880 345 ntBASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Gm45856-201ENSMUST00000212752 416 ntBASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Prpf38bQ80SY5 Gm37785-201ENSMUST00000195783 2408 ntBASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Gm14644-201ENSMUST00000116671 647 ntBASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Gm24845-201ENSMUST00000158034 109 ntBASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Mir6923-201ENSMUST00000184592 72 ntBASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms