Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 CT010506.1-201ENSMUST00000223673 349 ntBASIC13.49□□□□□ -0.25
Ddx55Q6ZPL9 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC13.49□□□□□ -0.25
Ddx55Q6ZPL9 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx55Q6ZPL9 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx55Q6ZPL9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx55Q6ZPL9 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ddx55Q6ZPL9 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.49□□□□□ -0.25
Ddx55Q6ZPL9 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx55Q6ZPL9 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx55Q6ZPL9 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.49□□□□□ -0.25
Ddx55Q6ZPL9 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx55Q6ZPL9 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx55Q6ZPL9 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx55Q6ZPL9 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx55Q6ZPL9 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.49□□□□□ -0.25
Ddx55Q6ZPL9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx55Q6ZPL9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx55Q6ZPL9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx55Q6ZPL9 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ddx55Q6ZPL9 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Gm13351-201ENSMUST00000118087 414 ntBASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Gm15036-201ENSMUST00000118880 400 ntBASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Gm14441-201ENSMUST00000121960 540 ntBASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Gm19015-201ENSMUST00000184002 1189 ntBASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Mt1-202ENSMUST00000211807 1085 ntBASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Gm19640-201ENSMUST00000214849 464 ntBASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 CT009527.1-201ENSMUST00000224205 339 ntBASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Rubie-203ENSMUST00000227803 2430 ntBASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Ddx55Q6ZPL9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 AC158636.1-201ENSMUST00000220118 1393 ntBASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Gm25053-201ENSMUST00000103982 133 ntBASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Gm25922-201ENSMUST00000104281 130 ntBASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Gm24791-201ENSMUST00000104284 131 ntBASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Gm11560-201ENSMUST00000117567 948 ntBASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Gm12247-201ENSMUST00000117585 670 ntBASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Gm7541-201ENSMUST00000118361 535 ntBASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Gm12948-201ENSMUST00000119406 682 ntBASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Gm12791-201ENSMUST00000120788 655 ntBASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Gm22379-201ENSMUST00000157480 131 ntBASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Gm24679-201ENSMUST00000158762 111 ntBASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 AC238811.4-201ENSMUST00000178019 1246 ntBASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 AC238940.3-201ENSMUST00000178830 1246 ntBASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Gm37638-201ENSMUST00000194337 1123 ntBASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Gm25053-202ENSMUST00000199731 132 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms