Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nudcd1Q6PIP5 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Gm15004-201ENSMUST00000119192 630 ntBASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Gm8199-201ENSMUST00000121323 823 ntBASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Gm37835-201ENSMUST00000193305 361 ntBASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Ginm1-202ENSMUST00000065124 300 ntBASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nudcd1Q6PIP5 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Gm27177-202ENSMUST00000183514 2703 ntBASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Gm15432-201ENSMUST00000121106 195 ntBASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Gm37246-201ENSMUST00000192665 835 ntBASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Gm38228-201ENSMUST00000193169 1293 ntBASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Gm2553-201ENSMUST00000215986 605 ntBASIC12□□□□□ -0.49
Nudcd1Q6PIP5 AC154276.3-201ENSMUST00000227643 998 ntBASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nudcd1Q6PIP5 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms