Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Gm13126-201ENSMUST00000117079 3063 ntBASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Gm22121-201ENSMUST00000175148 54 ntBASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Gm8515-201ENSMUST00000194852 576 ntBASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Gm19040-201ENSMUST00000203280 4726 ntBASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Rnf220Q6PDX6 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Gm6714-201ENSMUST00000218677 2330 ntBASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms