Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm20414-201ENSMUST00000172918 646 ntBASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Gm37284-201ENSMUST00000193607 539 ntBASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Gm43102-201ENSMUST00000201004 2324 ntBASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Gm24809-201ENSMUST00000175318 271 ntBASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd4Q6PDQ2 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Gm6024-201ENSMUST00000117850 1558 ntBASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Gm45758-201ENSMUST00000212448 1006 ntBASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Gm5308-201ENSMUST00000196752 1354 ntBASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chd4Q6PDQ2 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 Gm12274-201ENSMUST00000120062 385 ntBASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 Gm15197-201ENSMUST00000120526 478 ntBASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 Gm5700-201ENSMUST00000191483 989 ntBASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 Gm3433-201ENSMUST00000210149 1058 ntBASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd4Q6PDQ2 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Chd4Q6PDQ2 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC15.21■□□□□ 0.02
Chd4Q6PDQ2 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chd4Q6PDQ2 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Chd4Q6PDQ2 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms