Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smarcd3Q6P9Z1 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.9□□□□□ -0.67
Smarcd3Q6P9Z1 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.9□□□□□ -0.67
Smarcd3Q6P9Z1 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.9□□□□□ -0.67
Smarcd3Q6P9Z1 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Gm5706-201ENSMUST00000181525 993 ntBASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Gm9136-201ENSMUST00000193368 454 ntBASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Gm9996-201ENSMUST00000070359 913 ntBASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.89□□□□□ -0.67
Smarcd3Q6P9Z1 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Gm4986-201ENSMUST00000119731 549 ntBASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Gm27514-201ENSMUST00000183692 110 ntBASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Gm5370-201ENSMUST00000187187 574 ntBASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms