Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Gm43822-201ENSMUST00000200285 476 ntBASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Gm9899-201ENSMUST00000065519 555 ntBASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sp140Q6NSQ5 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Gm22323-201ENSMUST00000103832 109 ntBASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Gm9192-201ENSMUST00000183221 985 ntBASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Gm32999-201ENSMUST00000192693 562 ntBASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Gm37259-201ENSMUST00000193903 849 ntBASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sp140Q6NSQ5 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms