Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Gm12986-201ENSMUST00000119037 967 ntBASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Gm15136-201ENSMUST00000120552 533 ntBASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Gm9625-201ENSMUST00000180422 955 ntBASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 AC129975.1-201ENSMUST00000224816 592 ntBASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Gm26616-202ENSMUST00000195676 3107 ntBASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Ntrk2-209ENSMUST00000225950 2640 ntBASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Gm42970-201ENSMUST00000196407 1352 ntBASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Gm29808-201ENSMUST00000194419 468 ntBASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Gm43167-201ENSMUST00000202001 1606 ntBASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 AC159810.1-201ENSMUST00000214838 1480 ntBASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Gm14052-201ENSMUST00000121434 1031 ntBASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarca2Q6DIC0 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Mrip-ps-201ENSMUST00000184613 940 ntBASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Gm26782-203ENSMUST00000227103 751 ntBASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Ptprs-211ENSMUST00000223859 5588 ntBASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Gm45416-201ENSMUST00000209713 2201 ntBASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smarca2Q6DIC0 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarca2Q6DIC0 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarca2Q6DIC0 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smarca2Q6DIC0 Gm5395-201ENSMUST00000121650 915 ntBASIC20.27■□□□□ 0.84
Smarca2Q6DIC0 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC20.27■□□□□ 0.84
Smarca2Q6DIC0 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC20.27■□□□□ 0.84
Smarca2Q6DIC0 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarca2Q6DIC0 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC20.27■□□□□ 0.84
Smarca2Q6DIC0 Gm19927-201ENSMUST00000185792 781 ntBASIC20.27■□□□□ 0.84
Smarca2Q6DIC0 CT025618.1-203ENSMUST00000227008 589 ntBASIC20.27■□□□□ 0.84
Smarca2Q6DIC0 Gm25580-201ENSMUST00000083409 327 ntBASIC20.27■□□□□ 0.84
Smarca2Q6DIC0 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Smarca2Q6DIC0 Gm10580-201ENSMUST00000097985 396 ntBASIC20.27■□□□□ 0.84
Smarca2Q6DIC0 Gm10582-201ENSMUST00000097987 396 ntBASIC20.27■□□□□ 0.84
Smarca2Q6DIC0 Gm10583-201ENSMUST00000097988 396 ntBASIC20.27■□□□□ 0.84
Smarca2Q6DIC0 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Smarca2Q6DIC0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarca2Q6DIC0 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms