Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctr9Q62018 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctr9Q62018 Gm10288-201ENSMUST00000084614 537 ntBASIC14.05□□□□□ -0.16
Ctr9Q62018 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctr9Q62018 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.05□□□□□ -0.16
Ctr9Q62018 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ctr9Q62018 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ctr9Q62018 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.05□□□□□ -0.16
Ctr9Q62018 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ctr9Q62018 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctr9Q62018 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ctr9Q62018 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctr9Q62018 AC122840.1-201ENSMUST00000220915 3334 ntBASIC14.05□□□□□ -0.16
Ctr9Q62018 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctr9Q62018 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctr9Q62018 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ctr9Q62018 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctr9Q62018 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctr9Q62018 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.04□□□□□ -0.16
Ctr9Q62018 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctr9Q62018 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctr9Q62018 Gm24891-201ENSMUST00000104391 136 ntBASIC14.04□□□□□ -0.16
Ctr9Q62018 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.04□□□□□ -0.16
Ctr9Q62018 Gm13461-201ENSMUST00000120980 662 ntBASIC14.04□□□□□ -0.16
Ctr9Q62018 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.04□□□□□ -0.16
Ctr9Q62018 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.04□□□□□ -0.16
Ctr9Q62018 Gm37986-201ENSMUST00000193285 383 ntBASIC14.04□□□□□ -0.16
Ctr9Q62018 Gm19287-201ENSMUST00000203190 358 ntBASIC14.04□□□□□ -0.16
Ctr9Q62018 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctr9Q62018 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctr9Q62018 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctr9Q62018 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ctr9Q62018 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctr9Q62018 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ctr9Q62018 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctr9Q62018 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctr9Q62018 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ctr9Q62018 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC14.04□□□□□ -0.16
Ctr9Q62018 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctr9Q62018 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.03□□□□□ -0.16
Ctr9Q62018 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ctr9Q62018 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ctr9Q62018 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.03□□□□□ -0.16
Ctr9Q62018 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Gm13611-201ENSMUST00000118269 318 ntBASIC14.03□□□□□ -0.16
Ctr9Q62018 Gm12036-201ENSMUST00000120008 530 ntBASIC14.03□□□□□ -0.16
Ctr9Q62018 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Ctr9Q62018 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.03□□□□□ -0.16
Ctr9Q62018 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Gm9136-201ENSMUST00000193368 454 ntBASIC14.03□□□□□ -0.16
Ctr9Q62018 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.03□□□□□ -0.16
Ctr9Q62018 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.03□□□□□ -0.16
Ctr9Q62018 Gm42997-202ENSMUST00000200321 985 ntBASIC14.03□□□□□ -0.16
Ctr9Q62018 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.03□□□□□ -0.16
Ctr9Q62018 AC113082.1-201ENSMUST00000217324 327 ntBASIC14.03□□□□□ -0.16
Ctr9Q62018 Gm1821-202ENSMUST00000227415 750 ntBASIC14.03□□□□□ -0.16
Ctr9Q62018 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Ctr9Q62018 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Ctr9Q62018 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ctr9Q62018 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.03□□□□□ -0.16
Ctr9Q62018 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ctr9Q62018 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctr9Q62018 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ctr9Q62018 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Ctr9Q62018 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ctr9Q62018 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ctr9Q62018 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ctr9Q62018 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ctr9Q62018 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ctr9Q62018 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ctr9Q62018 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.02□□□□□ -0.16
Ctr9Q62018 Gm38273-201ENSMUST00000194987 2382 ntBASIC14.02□□□□□ -0.16
Ctr9Q62018 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms