Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Smarcd1Q61466 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd1Q61466 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd1Q61466 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Gm13611-201ENSMUST00000118269 318 ntBASIC12.36□□□□□ -0.43
Smarcd1Q61466 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.36□□□□□ -0.43
Smarcd1Q61466 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Gm10774-201ENSMUST00000188689 204 ntBASIC12.36□□□□□ -0.43
Smarcd1Q61466 Gm29499-201ENSMUST00000189151 486 ntBASIC12.36□□□□□ -0.43
Smarcd1Q61466 Gm28329-201ENSMUST00000191208 689 ntBASIC12.36□□□□□ -0.43
Smarcd1Q61466 Gm29171-201ENSMUST00000191397 486 ntBASIC12.36□□□□□ -0.43
Smarcd1Q61466 Gm44100-201ENSMUST00000204329 436 ntBASIC12.36□□□□□ -0.43
Smarcd1Q61466 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.36□□□□□ -0.43
Smarcd1Q61466 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.36□□□□□ -0.43
Smarcd1Q61466 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.36□□□□□ -0.43
Smarcd1Q61466 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.36□□□□□ -0.43
Smarcd1Q61466 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd1Q61466 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd1Q61466 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.35□□□□□ -0.43
Smarcd1Q61466 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.35□□□□□ -0.43
Smarcd1Q61466 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd1Q61466 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Gm12579-201ENSMUST00000118040 783 ntBASIC12.35□□□□□ -0.43
Smarcd1Q61466 Gm13408-201ENSMUST00000119822 798 ntBASIC12.35□□□□□ -0.43
Smarcd1Q61466 Gm15595-201ENSMUST00000120840 961 ntBASIC12.35□□□□□ -0.43
Smarcd1Q61466 Gm15432-201ENSMUST00000121106 195 ntBASIC12.35□□□□□ -0.43
Smarcd1Q61466 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.35□□□□□ -0.43
Smarcd1Q61466 Gm13935-201ENSMUST00000121859 798 ntBASIC12.35□□□□□ -0.43
Smarcd1Q61466 Gm10051-201ENSMUST00000145209 414 ntBASIC12.35□□□□□ -0.43
Smarcd1Q61466 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.35□□□□□ -0.43
Smarcd1Q61466 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Gm37986-201ENSMUST00000193285 383 ntBASIC12.35□□□□□ -0.43
Smarcd1Q61466 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Smarcd1Q61466 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd1Q61466 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd1Q61466 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd1Q61466 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.34□□□□□ -0.43
Smarcd1Q61466 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms