Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC11.41□□□□□ -0.58
Col12a1Q60847 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC11.41□□□□□ -0.58
Col12a1Q60847 Gm20091-201ENSMUST00000179683 189 ntBASIC11.41□□□□□ -0.58
Col12a1Q60847 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col12a1Q60847 Gm43564-201ENSMUST00000196185 211 ntBASIC11.41□□□□□ -0.58
Col12a1Q60847 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC11.41□□□□□ -0.58
Col12a1Q60847 AC129217.1-201ENSMUST00000225181 642 ntBASIC11.41□□□□□ -0.58
Col12a1Q60847 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col12a1Q60847 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Col12a1Q60847 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Col12a1Q60847 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC11.41□□□□□ -0.58
Col12a1Q60847 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col12a1Q60847 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col12a1Q60847 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.41□□□□□ -0.58
Col12a1Q60847 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.41□□□□□ -0.58
Col12a1Q60847 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.41□□□□□ -0.58
Col12a1Q60847 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Col12a1Q60847 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Col12a1Q60847 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Col12a1Q60847 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col12a1Q60847 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col12a1Q60847 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col12a1Q60847 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col12a1Q60847 Gm15528-201ENSMUST00000117821 864 ntBASIC11.41□□□□□ -0.58
Col12a1Q60847 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col12a1Q60847 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Col12a1Q60847 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.41□□□□□ -0.58
Col12a1Q60847 Gm44882-201ENSMUST00000205702 802 ntBASIC11.41□□□□□ -0.58
Col12a1Q60847 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col12a1Q60847 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Col12a1Q60847 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col12a1Q60847 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Col12a1Q60847 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Col12a1Q60847 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col12a1Q60847 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.41□□□□□ -0.58
Col12a1Q60847 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col12a1Q60847 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col12a1Q60847 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col12a1Q60847 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Col12a1Q60847 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col12a1Q60847 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col12a1Q60847 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col12a1Q60847 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col12a1Q60847 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Col12a1Q60847 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col12a1Q60847 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.4□□□□□ -0.58
Col12a1Q60847 Gm7765-201ENSMUST00000182585 974 ntBASIC11.4□□□□□ -0.58
Col12a1Q60847 AC107752.1-201ENSMUST00000219362 469 ntBASIC11.4□□□□□ -0.58
Col12a1Q60847 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Col12a1Q60847 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Col12a1Q60847 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col12a1Q60847 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Col12a1Q60847 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col12a1Q60847 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Col12a1Q60847 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col12a1Q60847 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col12a1Q60847 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.4□□□□□ -0.58
Col12a1Q60847 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Col12a1Q60847 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col12a1Q60847 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col12a1Q60847 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Col12a1Q60847 Gm22661-201ENSMUST00000104192 132 ntBASIC11.4□□□□□ -0.58
Col12a1Q60847 Gm5071-201ENSMUST00000104922 1035 ntBASIC11.4□□□□□ -0.58
Col12a1Q60847 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC11.4□□□□□ -0.58
Col12a1Q60847 Gm13284-201ENSMUST00000121020 547 ntBASIC11.4□□□□□ -0.58
Col12a1Q60847 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col12a1Q60847 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.4□□□□□ -0.58
Col12a1Q60847 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.4□□□□□ -0.58
Col12a1Q60847 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.4□□□□□ -0.58
Col12a1Q60847 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col12a1Q60847 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Col12a1Q60847 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col12a1Q60847 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col12a1Q60847 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Col12a1Q60847 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Col12a1Q60847 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Col12a1Q60847 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col12a1Q60847 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col12a1Q60847 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Col12a1Q60847 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Col12a1Q60847 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.4□□□□□ -0.59
Col12a1Q60847 Gm43117-201ENSMUST00000198531 379 ntBASIC11.4□□□□□ -0.59
Col12a1Q60847 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC11.4□□□□□ -0.59
Col12a1Q60847 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Col12a1Q60847 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC11.4□□□□□ -0.59
Col12a1Q60847 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col12a1Q60847 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Col12a1Q60847 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col12a1Q60847 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col12a1Q60847 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Col12a1Q60847 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Col12a1Q60847 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col12a1Q60847 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col12a1Q60847 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col12a1Q60847 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Col12a1Q60847 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col12a1Q60847 Gm3828-201ENSMUST00000121817 257 ntBASIC11.39□□□□□ -0.59
Col12a1Q60847 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC11.39□□□□□ -0.59
Col12a1Q60847 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC11.39□□□□□ -0.59
Col12a1Q60847 Gm28937-201ENSMUST00000185413 695 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms