Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Vps54Q5SPW0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Gm43773-201ENSMUST00000198548 2162 ntBASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC14.23□□□□□ -0.13
Vps54Q5SPW0 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Gm8815-201ENSMUST00000173809 620 ntBASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Gm28937-201ENSMUST00000185413 695 ntBASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Gm29400-201ENSMUST00000187208 695 ntBASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Gm28662-201ENSMUST00000188446 695 ntBASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Gm28251-201ENSMUST00000188835 695 ntBASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Gm37318-201ENSMUST00000194325 695 ntBASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Gm38017-201ENSMUST00000194768 695 ntBASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Gm37287-201ENSMUST00000195449 695 ntBASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Gm37793-201ENSMUST00000195548 695 ntBASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Ntng1-201ENSMUST00000051253 327 ntBASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps54Q5SPW0 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Gm9062-201ENSMUST00000117712 727 ntBASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Gm13809-201ENSMUST00000117921 597 ntBASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Gm45113-201ENSMUST00000207518 165 ntBASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Ginm1-202ENSMUST00000065124 300 ntBASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Gm8146-201ENSMUST00000192106 1847 ntBASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Gm18986-201ENSMUST00000216029 1986 ntBASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Vps54Q5SPW0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms