Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC20.71■□□□□ 0.91
Trim41Q5NCC3 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim41Q5NCC3 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC20.71■□□□□ 0.91
Trim41Q5NCC3 AC102368.1-201ENSMUST00000227161 892 ntBASIC20.71■□□□□ 0.91
Trim41Q5NCC3 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim41Q5NCC3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim41Q5NCC3 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim41Q5NCC3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim41Q5NCC3 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim41Q5NCC3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim41Q5NCC3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim41Q5NCC3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim41Q5NCC3 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim41Q5NCC3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim41Q5NCC3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim41Q5NCC3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim41Q5NCC3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim41Q5NCC3 n-R5s64-201ENSMUST00000102019 119 ntBASIC20.7■□□□□ 0.9
Trim41Q5NCC3 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim41Q5NCC3 Gm11949-201ENSMUST00000117640 372 ntBASIC20.7■□□□□ 0.9
Trim41Q5NCC3 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Trim41Q5NCC3 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC20.7■□□□□ 0.9
Trim41Q5NCC3 Gm6450-201ENSMUST00000200896 574 ntBASIC20.7■□□□□ 0.9
Trim41Q5NCC3 Gm44270-201ENSMUST00000203084 1234 ntBASIC20.7■□□□□ 0.9
Trim41Q5NCC3 Gm2594-201ENSMUST00000214774 742 ntBASIC20.7■□□□□ 0.9
Trim41Q5NCC3 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim41Q5NCC3 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC20.7■□□□□ 0.9
Trim41Q5NCC3 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Trim41Q5NCC3 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim41Q5NCC3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim41Q5NCC3 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim41Q5NCC3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC20.7■□□□□ 0.9
Trim41Q5NCC3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim41Q5NCC3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC20.7■□□□□ 0.9
Trim41Q5NCC3 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Trim41Q5NCC3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim41Q5NCC3 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim41Q5NCC3 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim41Q5NCC3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 AC138716.2-201ENSMUST00000226670 1016 ntBASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim41Q5NCC3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Gm11578-201ENSMUST00000118530 459 ntBASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Gm43186-201ENSMUST00000198130 824 ntBASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Gm44124-201ENSMUST00000204159 472 ntBASIC20.68■□□□□ 0.9
Trim41Q5NCC3 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Gm5805-201ENSMUST00000072779 456 ntBASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim41Q5NCC3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms