Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.14□□□□□ -0.47
Spire1Q52KF3 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Spire1Q52KF3 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Spire1Q52KF3 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Spire1Q52KF3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Spire1Q52KF3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Spire1Q52KF3 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.14□□□□□ -0.47
Spire1Q52KF3 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.14□□□□□ -0.47
Spire1Q52KF3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Spire1Q52KF3 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Spire1Q52KF3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Spire1Q52KF3 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Spire1Q52KF3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Spire1Q52KF3 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Spire1Q52KF3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spire1Q52KF3 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.13□□□□□ -0.47
Spire1Q52KF3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Gm25076-201ENSMUST00000104098 132 ntBASIC12.13□□□□□ -0.47
Spire1Q52KF3 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.13□□□□□ -0.47
Spire1Q52KF3 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.13□□□□□ -0.47
Spire1Q52KF3 Gm10731-201ENSMUST00000181171 448 ntBASIC12.13□□□□□ -0.47
Spire1Q52KF3 Mir6998-201ENSMUST00000183343 64 ntBASIC12.13□□□□□ -0.47
Spire1Q52KF3 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Gm29155-201ENSMUST00000185910 269 ntBASIC12.13□□□□□ -0.47
Spire1Q52KF3 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Gm17877-201ENSMUST00000192578 814 ntBASIC12.13□□□□□ -0.47
Spire1Q52KF3 Gm37905-201ENSMUST00000195310 341 ntBASIC12.13□□□□□ -0.47
Spire1Q52KF3 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spire1Q52KF3 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.13□□□□□ -0.47
Spire1Q52KF3 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Spire1Q52KF3 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.13□□□□□ -0.47
Spire1Q52KF3 Pck2-205ENSMUST00000226352 2784 ntBASIC12.13□□□□□ -0.47
Spire1Q52KF3 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.12□□□□□ -0.47
Spire1Q52KF3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Map1b-203ENSMUST00000223725 2669 ntBASIC12.12□□□□□ -0.47
Spire1Q52KF3 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.12□□□□□ -0.47
Spire1Q52KF3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.12□□□□□ -0.47
Spire1Q52KF3 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.12□□□□□ -0.47
Spire1Q52KF3 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Gm37981-201ENSMUST00000194280 535 ntBASIC12.12□□□□□ -0.47
Spire1Q52KF3 Gm44329-201ENSMUST00000197469 112 ntBASIC12.12□□□□□ -0.47
Spire1Q52KF3 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.12□□□□□ -0.47
Spire1Q52KF3 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.12□□□□□ -0.47
Spire1Q52KF3 Gm5451-201ENSMUST00000080545 579 ntBASIC12.12□□□□□ -0.47
Spire1Q52KF3 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spire1Q52KF3 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms