Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Upf3bQ3ULL6 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upf3bQ3ULL6 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upf3bQ3ULL6 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upf3bQ3ULL6 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upf3bQ3ULL6 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upf3bQ3ULL6 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upf3bQ3ULL6 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upf3bQ3ULL6 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upf3bQ3ULL6 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upf3bQ3ULL6 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upf3bQ3ULL6 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Upf3bQ3ULL6 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upf3bQ3ULL6 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upf3bQ3ULL6 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Gm14277-201ENSMUST00000121195 360 ntBASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Gm270-201ENSMUST00000223010 976 ntBASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Gm26448-201ENSMUST00000082446 203 ntBASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Upf3bQ3ULL6 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Gm14441-201ENSMUST00000121960 540 ntBASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Gm29199-201ENSMUST00000187766 775 ntBASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Gm18730-201ENSMUST00000218038 343 ntBASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3bQ3ULL6 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upf3bQ3ULL6 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upf3bQ3ULL6 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.71□□□□□ -0.38
Upf3bQ3ULL6 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 104.5 ms