Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Limch1Q3UH68 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14□□□□□ -0.17
Limch1Q3UH68 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Limch1Q3UH68 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Limch1Q3UH68 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC14□□□□□ -0.17
Limch1Q3UH68 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Limch1Q3UH68 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Limch1Q3UH68 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14□□□□□ -0.17
Limch1Q3UH68 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14□□□□□ -0.17
Limch1Q3UH68 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14□□□□□ -0.17
Limch1Q3UH68 Gm7722-201ENSMUST00000120646 741 ntBASIC14□□□□□ -0.17
Limch1Q3UH68 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14□□□□□ -0.17
Limch1Q3UH68 Gm37666-201ENSMUST00000194110 866 ntBASIC14□□□□□ -0.17
Limch1Q3UH68 Gm44136-201ENSMUST00000203819 1106 ntBASIC14□□□□□ -0.17
Limch1Q3UH68 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14□□□□□ -0.17
Limch1Q3UH68 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC14□□□□□ -0.17
Limch1Q3UH68 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14□□□□□ -0.17
Limch1Q3UH68 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14□□□□□ -0.17
Limch1Q3UH68 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Limch1Q3UH68 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Limch1Q3UH68 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC14□□□□□ -0.17
Limch1Q3UH68 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Limch1Q3UH68 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Limch1Q3UH68 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14□□□□□ -0.17
Limch1Q3UH68 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14□□□□□ -0.17
Limch1Q3UH68 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Limch1Q3UH68 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Limch1Q3UH68 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Limch1Q3UH68 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Limch1Q3UH68 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Limch1Q3UH68 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Limch1Q3UH68 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.99□□□□□ -0.17
Limch1Q3UH68 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Gm18558-201ENSMUST00000186253 1214 ntBASIC13.99□□□□□ -0.17
Limch1Q3UH68 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Gm19187-201ENSMUST00000206781 892 ntBASIC13.99□□□□□ -0.17
Limch1Q3UH68 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.99□□□□□ -0.17
Limch1Q3UH68 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.99□□□□□ -0.17
Limch1Q3UH68 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Limch1Q3UH68 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Limch1Q3UH68 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.98□□□□□ -0.17
Limch1Q3UH68 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Limch1Q3UH68 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Gm5419-201ENSMUST00000119301 527 ntBASIC13.98□□□□□ -0.17
Limch1Q3UH68 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.98□□□□□ -0.17
Limch1Q3UH68 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.98□□□□□ -0.17
Limch1Q3UH68 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Gm9230-201ENSMUST00000188228 532 ntBASIC13.98□□□□□ -0.17
Limch1Q3UH68 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.98□□□□□ -0.17
Limch1Q3UH68 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.98□□□□□ -0.17
Limch1Q3UH68 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Limch1Q3UH68 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.98□□□□□ -0.17
Limch1Q3UH68 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms