Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Pkd1l3Q2EG98 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pkd1l3Q2EG98 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pkd1l3Q2EG98 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Pkd1l3Q2EG98 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pkd1l3Q2EG98 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Pkd1l3Q2EG98 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pkd1l3Q2EG98 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pkd1l3Q2EG98 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pkd1l3Q2EG98 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Pkd1l3Q2EG98 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pkd1l3Q2EG98 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pkd1l3Q2EG98 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pkd1l3Q2EG98 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pkd1l3Q2EG98 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pkd1l3Q2EG98 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pkd1l3Q2EG98 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.67□□□□□ -0.7
Pkd1l3Q2EG98 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pkd1l3Q2EG98 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pkd1l3Q2EG98 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Pkd1l3Q2EG98 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pkd1l3Q2EG98 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pkd1l3Q2EG98 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pkd1l3Q2EG98 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Gm13937-201ENSMUST00000121000 988 ntBASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Mir8115-201ENSMUST00000184992 119 ntBASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.66□□□□□ -0.7
Pkd1l3Q2EG98 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Gm12029-201ENSMUST00000120073 832 ntBASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Gm11660-201ENSMUST00000120955 412 ntBASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Gm44545-201ENSMUST00000208262 746 ntBASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Gm3028-201ENSMUST00000213805 1119 ntBASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Gm2553-201ENSMUST00000215986 605 ntBASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Pkd1l3Q2EG98 Pcgf5-211ENSMUST00000225920 6443 ntBASIC10.65□□□□□ -0.71
Pkd1l3Q2EG98 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Pkd1l3Q2EG98 Gm12419-201ENSMUST00000116649 636 ntBASIC10.65□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms